Skills/PyPI/alphafold-sovereign-mcp

alphafold-sovereign-mcp@1.5.7

VERIFIED

Publisher claims: "MCP server wrapping AlphaFold DB and 8 other biomedical data sources, with a local SQLite knowledge graph." Observed in sandbox: no network, touches nothing outside the project, writes no memory.

Registry PyPI (MCP server)Publisher smaniches · joined 0 days agoInstalls 745Last detonated 2 h ago
$claude mcp add alphafold-sovereign-mcp -- uvx alphafold-sovereign-mcp
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Is [email protected] safe to install?

KillerSkills ran it in the KillerSkills honeypot sandbox (2 scenarios) on 2026-10-27 and scored it 82/100 (Verified). It did what it claims and nothing else we could detect: no undeclared network egress, no credential reads, no persistent instruction writes. Summary: no network, touches nothing outside the project, writes no memory.

Behavior trace

Honeypot run · 0 s · 2 scenarios · 0 deviations
t+CategoryObserved action
0.0sprocessno install scripts in bundle
0.2sprocessdependency install exit 1
0.2sprocessexec /usr/bin/timeout
0.2sprocessexec .venv/bin/alphafold-sovereign
0.2sprocessexited 127: timeout: failed to run command '.venv/bin/alphafold-sovereign': No such file or directory
0.2sclaimedno tools/list reply (exit 127)
0.2sprocessscript backend runs setup only

Static findings

MEDIUM
Python subprocess execution detectedtests/test_release_integrity.py:97 · Python subprocess execution detectedFix: Build commands from fixed arguments, never from interpolated strings; prefer an API client over shelling out.
AST05
MEDIUM
Python subprocess execution detectedtests/test_release_integrity.py:83 · Python subprocess execution detectedFix: Build commands from fixed arguments, never from interpolated strings; prefer an API client over shelling out.
AST05
MEDIUM
Python subprocess execution detectedtests/test_release_sbom_binding.py:74 · Python subprocess execution detectedFix: Build commands from fixed arguments, never from interpolated strings; prefer an API client over shelling out.
AST05
MEDIUM
Python subprocess execution detectedtests/test_release_integrity.py:15 · Python subprocess execution detectedFix: Build commands from fixed arguments, never from interpolated strings; prefer an API client over shelling out.
AST05
MEDIUM
Python subprocess execution detectedtests/test_release_integrity.py:66 · Python subprocess execution detectedFix: Build commands from fixed arguments, never from interpolated strings; prefer an API client over shelling out.
AST05
MEDIUM
Python subprocess execution detectedtests/test_release_dry_run.py:20 · Python subprocess execution detectedFix: Build commands from fixed arguments, never from interpolated strings; prefer an API client over shelling out.
AST05
MEDIUM
Python subprocess execution detectedtests/test_release_integrity.py:54 · Python subprocess execution detectedFix: Build commands from fixed arguments, never from interpolated strings; prefer an API client over shelling out.
AST05
MEDIUM
URL with embedded credentialstests/test_base_client_full.py:186 · URL with embedded credentials — may be phishing or credential leakingFix: Stop enumerating or reading credential locations; take secrets from a declared environment variable the user sets on purpose.
AST07