Knowledge Graph Registry Curation

This skill provides guidelines for contributing to the Knowledge Graph Registry, a collection of resources and tools for managing and sharing metadata about knowledge graphs and their relationships.

Overview

The Knowledge Graph Registry maintains structured metadata about knowledge graphs, data sources, and their interconnections. This skill helps you properly add and curate resources while maintaining schema compliance and data quality.

General Guidelines for Adding Resources and Products

Schema Compliance

Directory Structure

Resource Entry Requirements

When creating or updating Resource entries:

1. Include at least one entry in the `Products` field

2. If a Product references another Resource, find that Resource's ID and add it to the Product's `original_source` field

- Example: For "A mapping file to WikiPathways", include `wikipathways` in `original_source`

Date Fields

Other Fields

Quick Curation Workflow

Follow these steps to curate stub Resource pages:

1. Identify Stub Resources

Find all stub Resource pages by looking for `stub` in their `domains` list.

2. Select a Resource

Choose a stub page at random. Skip it if already mentioned in `reports/curation_problems.tsv`.

3. Research the Resource

4. Expand the Resource Page

- Log them in `reports/curation_problems.tsv`

- Move to another Resource

5. Validate

Run validation before continuing:

```bash

poetry run make validate-file

```

Correct any validity issues before proceeding.

6. Iterate

Repeat steps 2-5 until you've curated at least 5 Resources.

Validation

Use the existing Poetry environment to validate Resource or Product pages:

```bash

Precede any make command with poetry run

poetry run make validate-file

```

Ensure all validation passes before submitting changes.

Example Product Entry

When a Product references another Resource:

```yaml

products:

- id: wikipathways_mapping

name: WikiPathways Mapping

description: A mapping file to WikiPathways

category: Product

original_source:

- wikipathways # ID of the referenced Resource

```

Key Constraints